msmbuilder.tpt.calculate_net_fluxes¶
- msmbuilder.tpt.calculate_net_fluxes(sources, sinks, tprob, populations=None, committors=None)[source]¶
Computes the transition path theory net flux matrix.
Parameters: sources : array_like, int
The set of unfolded/reactant states.
sinks : array_like, int
The set of folded/product states.
tprob : mm_matrix
The transition matrix.
Returns :
—— :
net_fluxes : mm_matrix
The net flux matrix