Welcome to MSMBuilder’s documentation!¶
Contents:
- MSMBuilder Introduction
- What’s New
- Distance Metrics: msmbuilder.metrics
- Clustering: msmbuilder.clustering
- assigning: msmbuilder.assigning
- MSM Construction: msmbuilder.MSMLib
- MSM Analysis: msmbuilder.msm_analysis
- Lumping: msmbuilder.lumping
- Transition Path Theory : msmbuilder.tpt
- Cut Based Free Energy Profile msmbuilder.cfep
- Container Classes: Serializer, Conformation, Trajectory
- arglib: msmbuilder.arglib
- Utilities: msmbuilder.utils
- Project: msmbuilder.Project
- FahProject: msmbuilder.FahProject
- Contributing